BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013D08LP1|AL426515
(815 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig694 1525 0.0
>3x_Contig694
Length = 2435
Score = 1525 bits (763), Expect = 0.0
Identities = 797/815 (97%)
Strand = Plus / Plus
Query: 1 gatctttttcgaatgcatttgatgataaattggctgatggtaggtttaacttgaccaatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772 gatctttttcgaatgcatttgatgataaattggctgatggtaggtttaacttgaccaatc 831
Query: 61 tcttttgaaggggaatccaaacatccgcatctatcaaatgtaacgaagagtgaaggkaga 120
||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 832 tcttttgaaggtgaatccaaacatccgcatctatcaaatgtaacgaagagtgaaggtaga 891
Query: 121 aatkagttctaatagtttctgcatgttctacatcaaggccccattttctggcaattgatg 180
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892 aattagttctaatagtttctgcatgttctacatcaaggccccattttctggcaattgatg 951
Query: 181 ttactactttctgcggrattggcttattgcagagcttgaagtcccaaaacctggtcgaaa 240
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 952 ttactactttctgcggaattggcttattgcagagcttgaagtcccaaaacctggtcgaaa 1011
Query: 241 cgtctaakattctgtccatttgaaggatttggataaaatatgcraataaacattgtgttt 300
||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1012 cgtctaatattctgtccatttgaaggatttggataaaatatgcaaataaacattgtgttt 1071
Query: 301 tattataaaacaagcttgtttttaataggtcatacttcttcgattgagtggcaagggaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1072 tattataaaacaagcttgtttttaataggtcatacttcttcgattgagttgcaagggaaa 1131
Query: 361 tgaaacatttttcagtaagatcatatagttctttcacgagctgcaatttcgagacagata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 tgaaacatttttcagtaagatcatatagttctttcacgagctgcaatttcgagacagata 1191
Query: 421 cggtaggkgcgttgatgttttcaacaacagttgatgctgcatgtcgttcagtcatctcca 480
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1192 cggtaggtgcgttgatgttttcaacaacagttgatgctgcatgtcgttcagtcatctcca 1251
Query: 481 aatctttttccaccaatgccaatttgagtgagagactgaggaaacataaagaractctca 540
||||||||||||||||||||||||||||| ||| |||||||||||||||||| |||||||
Sbjct: 1252 aatctttttccaccaatgccaatttgagtaagatactgaggaaacataaagaaactctca 1311
Query: 541 aataagattgttgaatgtgctttgcragtgcgtagcggaactgagcagtgtctttttcat 600
||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||
Sbjct: 1312 aataagattgttgaatgtgctttgcaagtacgtagcggaactgagcagtgtctttttcat 1371
Query: 601 atttrttgaacataagakcgggaaggaaactgtagaacttgaaacagttgaaaaccatca 660
|||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 1372 atttattgaacataagatcggaaaggaaactgtagaacttgaaacagttgaaaaccatca 1431
Query: 661 tttcaaatagagtagaatgcagcctataaaaggtggcattctcttccgattttagtttga 720
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1432 tgtcaaatagagtagaatgcagcctataaaaggtggcattctcttccgattttagtttga 1491
Query: 721 cttcgactttcaaatacaaagaccaaagtacattgtgaattagcgaacttgttgcaagct 780
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1492 cttcgactgtcaaatacaaagaccaaagtacattgtgaattagcgaacttgttgcaagct 1551
Query: 781 tcataatcacaatttcgcaacgcagaacctccgcg 815
|||||||||||||||||||||||||||||||||||
Sbjct: 1552 tcataatcacaatttcgcaacgcagaacctccgcg 1586
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6143
Number of Sequences: 1807
Number of extensions: 6143
Number of successful extensions: 33
Number of sequences better than 1.0e-20: 1
length of query: 815
length of database: 10,358,551
effective HSP length: 16
effective length of query: 799
effective length of database: 10,329,639
effective search space: 8253381561
effective search space used: 8253381561
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.4 bits)